Index

A

ACC (class in bio_rtd.uo.sc_uo) adj_par_list (bio_rtd.core.Inlet attribute) (bio_rtd.core.UnitOperation attribute) (bio_rtd.inlet.ConstantInlet attribute) (bio_rtd.inlet.CustomInlet attribute) (bio_rtd.inlet.IntervalInlet attribute) (bio_rtd.uo.fc_uo.BufferExchange attribute) (bio_rtd.uo.fc_uo.Concentration attribute) (bio_rtd.uo.fc_uo.Dilution attribute) (bio_rtd.uo.fc_uo.FlowThrough attribute) (bio_rtd.uo.fc_uo.FlowThroughWithSwitching attribute) (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) (bio_rtd.uo.special_uo.ComboUO attribute) (bio_rtd.uo.surge_tank.CSTR attribute) (bio_rtd.uo.surge_tank.TwoAlternatingCSTRs attribute)

AdjParBoolean (class in bio_rtd.adj_par) AdjParBooleanMultiple (class in bio_rtd.adj_par) AdjParRange (class in bio_rtd.adj_par) AdjParSlider (class in bio_rtd.adj_par) AdjustableParameter (class in bio_rtd.adj_par) allow_open_end (bio_rtd.pdf.TanksInSeries attribute) AlternatingChromatography (class in bio_rtd.uo.sc_uo) assert_and_get_provided_kv_pairs() (bio_rtd.chromatography.bt_load.ConstantPatternSolution method) (bio_rtd.core.ChromatographyLoadBreakthrough method) (bio_rtd.core.ParameterSetList method) (bio_rtd.core.PDF method) (bio_rtd.pdf.ExpModGaussianFixedDispersion method) (bio_rtd.pdf.ExpModGaussianFixedRelativeWidth method) (bio_rtd.pdf.GaussianFixedDispersion method) (bio_rtd.pdf.GaussianFixedRelativeWidth method) (bio_rtd.pdf.TanksInSeries method)

B

bio_rtd.adj_par module bio_rtd.chromatography.bt_curve module bio_rtd.chromatography.bt_load module bio_rtd.core module bio_rtd.inlet module bio_rtd.logger module bio_rtd.pdf module bio_rtd.peak_fitting module

bio_rtd.peak_shapes module bio_rtd.uo.fc_uo module bio_rtd.uo.sc_uo module bio_rtd.uo.special_uo module bio_rtd.uo.surge_tank module bio_rtd.utils.convolution module bio_rtd.utils.vectors module btc_constant_pattern_solution() (in module bio_rtd.chromatography.bt_curve) BufferExchange (class in bio_rtd.uo.fc_uo) build_ui() (bio_rtd.core.UserInterface method)

C

c (bio_rtd.inlet.ConstantInlet attribute) (bio_rtd.inlet.CustomInlet attribute) c_add_buffer (bio_rtd.uo.fc_uo.Dilution attribute) c_exchange_buffer (bio_rtd.uo.fc_uo.BufferExchange attribute) c_init (bio_rtd.uo.fc_uo.FlowThrough attribute) (bio_rtd.uo.fc_uo.FlowThroughWithSwitching attribute) (bio_rtd.uo.surge_tank.CSTR attribute) c_inner (bio_rtd.inlet.IntervalInlet attribute) c_outer (bio_rtd.inlet.IntervalInlet attribute) calc_c_bound() (bio_rtd.chromatography.bt_load.ConstantPatternSolution method) (bio_rtd.core.ChromatographyLoadBreakthrough method) calc_emg_parameters_from_peak_shape() (in module bio_rtd.peak_fitting) ChromatographyLoadBreakthrough (class in bio_rtd.core) collect_n_periods (bio_rtd.uo.surge_tank.TwoAlternatingCSTRs attribute) column_porosity_retentate (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute)

ComboUO (class in bio_rtd.uo.special_uo) Concentration (class in bio_rtd.uo.fc_uo) ConstantInlet (class in bio_rtd.inlet) ConstantPatternSolution (class in bio_rtd.chromatography.bt_load) CSTR (class in bio_rtd.uo.surge_tank) CustomInlet (class in bio_rtd.inlet) cutoff_relative_to_max (bio_rtd.core.PDF attribute) (bio_rtd.pdf.ExpModGaussianFixedDispersion attribute) (bio_rtd.pdf.ExpModGaussianFixedRelativeWidth attribute) (bio_rtd.pdf.GaussianFixedDispersion attribute) (bio_rtd.pdf.GaussianFixedRelativeWidth attribute) (bio_rtd.pdf.TanksInSeries attribute) cv (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute)

D

d_data() (bio_rtd.logger.RtdLogger method) DataStoringLogger (class in bio_rtd.logger) dbc_100 (bio_rtd.chromatography.bt_load.ConstantPatternSolution attribute) DEBUG (bio_rtd.logger.RtdLogger attribute) DefaultLogger (class in bio_rtd.logger) DefaultLoggerLogic (class in bio_rtd.core) desc (bio_rtd.core.RtdModel attribute) Dilution (class in bio_rtd.uo.fc_uo) dilution_ratio (bio_rtd.uo.fc_uo.Dilution attribute) discard_inlet_n_cycles (bio_rtd.core.UnitOperation attribute) (bio_rtd.uo.fc_uo.BufferExchange attribute) (bio_rtd.uo.fc_uo.Concentration attribute) (bio_rtd.uo.fc_uo.Dilution attribute) (bio_rtd.uo.fc_uo.FlowThrough attribute) (bio_rtd.uo.fc_uo.FlowThroughWithSwitching attribute) (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) (bio_rtd.uo.special_uo.ComboUO attribute) (bio_rtd.uo.surge_tank.CSTR attribute) (bio_rtd.uo.surge_tank.TwoAlternatingCSTRs attribute) discard_inlet_until_min_c (bio_rtd.core.UnitOperation attribute) (bio_rtd.uo.fc_uo.BufferExchange attribute) (bio_rtd.uo.fc_uo.Concentration attribute) (bio_rtd.uo.fc_uo.Dilution attribute) (bio_rtd.uo.fc_uo.FlowThrough attribute) (bio_rtd.uo.fc_uo.FlowThroughWithSwitching attribute) (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) (bio_rtd.uo.special_uo.ComboUO attribute) (bio_rtd.uo.surge_tank.CSTR attribute) (bio_rtd.uo.surge_tank.TwoAlternatingCSTRs attribute) discard_inlet_until_min_c_rel (bio_rtd.core.UnitOperation attribute) (bio_rtd.uo.fc_uo.BufferExchange attribute) (bio_rtd.uo.fc_uo.Concentration attribute) (bio_rtd.uo.fc_uo.Dilution attribute) (bio_rtd.uo.fc_uo.FlowThrough attribute) (bio_rtd.uo.fc_uo.FlowThroughWithSwitching attribute) (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) (bio_rtd.uo.special_uo.ComboUO attribute) (bio_rtd.uo.surge_tank.CSTR attribute) (bio_rtd.uo.surge_tank.TwoAlternatingCSTRs attribute) discard_inlet_until_t (bio_rtd.core.UnitOperation attribute) (bio_rtd.uo.fc_uo.BufferExchange attribute) (bio_rtd.uo.fc_uo.Concentration attribute) (bio_rtd.uo.fc_uo.Dilution attribute) (bio_rtd.uo.fc_uo.FlowThrough attribute) (bio_rtd.uo.fc_uo.FlowThroughWithSwitching attribute) (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) (bio_rtd.uo.special_uo.ComboUO attribute) (bio_rtd.uo.surge_tank.CSTR attribute) (bio_rtd.uo.surge_tank.TwoAlternatingCSTRs attribute)

discard_outlet_n_cycles (bio_rtd.core.UnitOperation attribute) (bio_rtd.uo.fc_uo.BufferExchange attribute) (bio_rtd.uo.fc_uo.Concentration attribute) (bio_rtd.uo.fc_uo.Dilution attribute) (bio_rtd.uo.fc_uo.FlowThrough attribute) (bio_rtd.uo.fc_uo.FlowThroughWithSwitching attribute) (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) (bio_rtd.uo.special_uo.ComboUO attribute) (bio_rtd.uo.surge_tank.CSTR attribute) (bio_rtd.uo.surge_tank.TwoAlternatingCSTRs attribute) discard_outlet_until_min_c (bio_rtd.core.UnitOperation attribute) (bio_rtd.uo.fc_uo.BufferExchange attribute) (bio_rtd.uo.fc_uo.Concentration attribute) (bio_rtd.uo.fc_uo.Dilution attribute) (bio_rtd.uo.fc_uo.FlowThrough attribute) (bio_rtd.uo.fc_uo.FlowThroughWithSwitching attribute) (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) (bio_rtd.uo.special_uo.ComboUO attribute) (bio_rtd.uo.surge_tank.CSTR attribute) (bio_rtd.uo.surge_tank.TwoAlternatingCSTRs attribute) discard_outlet_until_min_c_rel (bio_rtd.core.UnitOperation attribute) (bio_rtd.uo.fc_uo.BufferExchange attribute) (bio_rtd.uo.fc_uo.Concentration attribute) (bio_rtd.uo.fc_uo.Dilution attribute) (bio_rtd.uo.fc_uo.FlowThrough attribute) (bio_rtd.uo.fc_uo.FlowThroughWithSwitching attribute) (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) (bio_rtd.uo.special_uo.ComboUO attribute) (bio_rtd.uo.surge_tank.CSTR attribute) (bio_rtd.uo.surge_tank.TwoAlternatingCSTRs attribute) discard_outlet_until_t (bio_rtd.core.UnitOperation attribute) (bio_rtd.uo.fc_uo.BufferExchange attribute) (bio_rtd.uo.fc_uo.Concentration attribute) (bio_rtd.uo.fc_uo.Dilution attribute) (bio_rtd.uo.fc_uo.FlowThrough attribute) (bio_rtd.uo.fc_uo.FlowThroughWithSwitching attribute) (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) (bio_rtd.uo.special_uo.ComboUO attribute) (bio_rtd.uo.surge_tank.CSTR attribute) (bio_rtd.uo.surge_tank.TwoAlternatingCSTRs attribute) dispersion_index (bio_rtd.pdf.ExpModGaussianFixedDispersion attribute) (bio_rtd.pdf.GaussianFixedDispersion attribute) dsp_uo_chain (bio_rtd.core.RtdModel attribute)

E

e() (bio_rtd.logger.RtdLogger method) elution_buffer_c (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) elution_cv (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) elution_f (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) elution_f_rel (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) elution_peak_cut_end_c_rel_to_peak_max (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) elution_peak_cut_end_cv (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) elution_peak_cut_end_peak_area_share (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) elution_peak_cut_end_t (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) elution_peak_cut_start_c_rel_to_peak_max (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) elution_peak_cut_start_cv (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) elution_peak_cut_start_peak_area_share (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) elution_peak_cut_start_t (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute)

elution_peak_position_cv (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) elution_peak_position_t (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) elution_peak_shape (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) elution_t (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) emg() (in module bio_rtd.peak_shapes) equilibration_cv (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) equilibration_f (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) equilibration_f_rel (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) equilibration_t (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) ERROR (bio_rtd.logger.RtdLogger attribute) evaluate() (bio_rtd.core.UnitOperation method) (bio_rtd.uo.fc_uo.BufferExchange method) (bio_rtd.uo.fc_uo.Concentration method) (bio_rtd.uo.fc_uo.Dilution method) (bio_rtd.uo.fc_uo.FlowThrough method) (bio_rtd.uo.fc_uo.FlowThroughWithSwitching method) (bio_rtd.uo.sc_uo.ACC method) (bio_rtd.uo.sc_uo.AlternatingChromatography method) (bio_rtd.uo.sc_uo.PCC method) (bio_rtd.uo.sc_uo.PCCWithWashDesorption method) (bio_rtd.uo.special_uo.ComboUO method) (bio_rtd.uo.surge_tank.CSTR method) (bio_rtd.uo.surge_tank.TwoAlternatingCSTRs method) exchange_ratio (bio_rtd.uo.fc_uo.BufferExchange attribute) ExpModGaussianFixedDispersion (class in bio_rtd.pdf) ExpModGaussianFixedRelativeWidth (class in bio_rtd.pdf)

F

f (bio_rtd.inlet.ConstantInlet attribute) (bio_rtd.inlet.CustomInlet attribute) (bio_rtd.inlet.IntervalInlet attribute) flow_reduction (bio_rtd.uo.fc_uo.Concentration attribute) FlowThrough (class in bio_rtd.uo.fc_uo)

FlowThroughWithSwitching (class in bio_rtd.uo.fc_uo) ft_mean_retentate (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute)

G

gaussian() (in module bio_rtd.peak_shapes) GaussianFixedDispersion (class in bio_rtd.pdf) GaussianFixedRelativeWidth (class in bio_rtd.pdf) get_data_tree() (bio_rtd.logger.RtdLogger method) get_dsp_uo() (bio_rtd.core.RtdModel method) get_entire_data_tree() (bio_rtd.logger.RtdLogger method) get_n_species() (bio_rtd.core.Inlet method) (bio_rtd.inlet.ConstantInlet method) (bio_rtd.inlet.CustomInlet method) (bio_rtd.inlet.IntervalInlet method) get_p() (bio_rtd.core.PDF method) (bio_rtd.pdf.ExpModGaussianFixedDispersion method) (bio_rtd.pdf.ExpModGaussianFixedRelativeWidth method) (bio_rtd.pdf.GaussianFixedDispersion method) (bio_rtd.pdf.GaussianFixedRelativeWidth method) (bio_rtd.pdf.TanksInSeries method) get_result() (bio_rtd.core.Inlet method) (bio_rtd.core.UnitOperation method) (bio_rtd.inlet.ConstantInlet method) (bio_rtd.inlet.CustomInlet method) (bio_rtd.inlet.IntervalInlet method) (bio_rtd.uo.fc_uo.BufferExchange method) (bio_rtd.uo.fc_uo.Concentration method) (bio_rtd.uo.fc_uo.Dilution method) (bio_rtd.uo.fc_uo.FlowThrough method) (bio_rtd.uo.fc_uo.FlowThroughWithSwitching method) (bio_rtd.uo.sc_uo.ACC method) (bio_rtd.uo.sc_uo.AlternatingChromatography method) (bio_rtd.uo.sc_uo.PCC method) (bio_rtd.uo.sc_uo.PCCWithWashDesorption method) (bio_rtd.uo.special_uo.ComboUO method) (bio_rtd.uo.surge_tank.CSTR method) (bio_rtd.uo.surge_tank.TwoAlternatingCSTRs method) get_t() (bio_rtd.core.Inlet method) (bio_rtd.inlet.ConstantInlet method) (bio_rtd.inlet.CustomInlet method) (bio_rtd.inlet.IntervalInlet method)

get_total_bc() (bio_rtd.chromatography.bt_load.ConstantPatternSolution method) (bio_rtd.core.ChromatographyLoadBreakthrough method) gui_hidden (bio_rtd.core.UnitOperation attribute) (bio_rtd.uo.fc_uo.BufferExchange attribute) (bio_rtd.uo.fc_uo.Concentration attribute) (bio_rtd.uo.fc_uo.Dilution attribute) (bio_rtd.uo.fc_uo.FlowThrough attribute) (bio_rtd.uo.fc_uo.FlowThroughWithSwitching attribute) (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) (bio_rtd.uo.special_uo.ComboUO attribute) (bio_rtd.uo.surge_tank.CSTR attribute) (bio_rtd.uo.surge_tank.TwoAlternatingCSTRs attribute) gui_title (bio_rtd.core.Inlet attribute) (bio_rtd.core.UnitOperation attribute) (bio_rtd.inlet.ConstantInlet attribute) (bio_rtd.inlet.CustomInlet attribute) (bio_rtd.inlet.IntervalInlet attribute) (bio_rtd.uo.fc_uo.BufferExchange attribute) (bio_rtd.uo.fc_uo.Concentration attribute) (bio_rtd.uo.fc_uo.Dilution attribute) (bio_rtd.uo.fc_uo.FlowThrough attribute) (bio_rtd.uo.fc_uo.FlowThroughWithSwitching attribute) (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) (bio_rtd.uo.special_uo.ComboUO attribute) (bio_rtd.uo.surge_tank.CSTR attribute) (bio_rtd.uo.surge_tank.TwoAlternatingCSTRs attribute) gui_type (bio_rtd.adj_par.AdjParBoolean attribute) (bio_rtd.adj_par.AdjParBooleanMultiple attribute) (bio_rtd.adj_par.AdjParRange attribute) (bio_rtd.adj_par.AdjParSlider attribute) (bio_rtd.adj_par.AdjustableParameter attribute)

I

i() (bio_rtd.logger.RtdLogger method) i_data() (bio_rtd.logger.RtdLogger method) INFO (bio_rtd.logger.RtdLogger attribute)

inlet (bio_rtd.core.RtdModel attribute) Inlet (class in bio_rtd.core) IntervalInlet (class in bio_rtd.inlet)

K

k (bio_rtd.chromatography.bt_load.ConstantPatternSolution attribute)

L

load_bt (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) load_c_end_estimate_with_iter_solver_max_iter (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) load_c_end_estimate_with_iterative_solver (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) load_c_end_relative_ss (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) load_c_end_ss (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) load_cv (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) load_extend_first_cycle (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) load_extend_first_cycle_cv (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) load_extend_first_cycle_t (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) load_recycle (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) load_recycle_pdf (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute)

load_target_lin_velocity (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) log() (bio_rtd.chromatography.bt_load.ConstantPatternSolution property) (bio_rtd.core.ChromatographyLoadBreakthrough property) (bio_rtd.core.DefaultLoggerLogic property) (bio_rtd.core.Inlet property) (bio_rtd.core.PDF property) (bio_rtd.core.RtdModel property) (bio_rtd.core.UnitOperation property) (bio_rtd.inlet.ConstantInlet property) (bio_rtd.inlet.CustomInlet property) (bio_rtd.inlet.IntervalInlet property) (bio_rtd.logger.DataStoringLogger method) (bio_rtd.logger.DefaultLogger method) (bio_rtd.logger.RtdLogger method) (bio_rtd.logger.StrictLogger method) (bio_rtd.pdf.ExpModGaussianFixedDispersion property) (bio_rtd.pdf.ExpModGaussianFixedRelativeWidth property) (bio_rtd.pdf.GaussianFixedDispersion property) (bio_rtd.pdf.GaussianFixedRelativeWidth property) (bio_rtd.pdf.TanksInSeries property) (bio_rtd.uo.fc_uo.BufferExchange property) (bio_rtd.uo.fc_uo.Concentration property) (bio_rtd.uo.fc_uo.Dilution property) (bio_rtd.uo.fc_uo.FlowThrough property) (bio_rtd.uo.fc_uo.FlowThroughWithSwitching property) (bio_rtd.uo.sc_uo.ACC property) (bio_rtd.uo.sc_uo.AlternatingChromatography property) (bio_rtd.uo.sc_uo.PCC property) (bio_rtd.uo.sc_uo.PCCWithWashDesorption property) (bio_rtd.uo.special_uo.ComboUO property) (bio_rtd.uo.surge_tank.CSTR property) (bio_rtd.uo.surge_tank.TwoAlternatingCSTRs property) losses_share (bio_rtd.uo.fc_uo.FlowThrough attribute) (bio_rtd.uo.fc_uo.FlowThroughWithSwitching attribute) losses_species_list (bio_rtd.uo.fc_uo.FlowThrough attribute) (bio_rtd.uo.fc_uo.FlowThroughWithSwitching attribute)

M

module bio_rtd.adj_par bio_rtd.chromatography.bt_curve bio_rtd.chromatography.bt_load bio_rtd.core bio_rtd.inlet bio_rtd.logger bio_rtd.pdf bio_rtd.peak_fitting bio_rtd.peak_shapes bio_rtd.uo.fc_uo bio_rtd.uo.sc_uo bio_rtd.uo.special_uo bio_rtd.uo.surge_tank bio_rtd.utils.convolution bio_rtd.utils.vectors

N

n_tanks (bio_rtd.pdf.TanksInSeries attribute) non_binding_species (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute)

non_retained_species (bio_rtd.uo.fc_uo.BufferExchange attribute) (bio_rtd.uo.fc_uo.Concentration attribute)

O

OPTIONAL_KEYS (bio_rtd.chromatography.bt_load.ConstantPatternSolution attribute) (bio_rtd.pdf.ExpModGaussianFixedDispersion attribute) (bio_rtd.pdf.ExpModGaussianFixedRelativeWidth attribute) (bio_rtd.pdf.GaussianFixedDispersion attribute) (bio_rtd.pdf.GaussianFixedRelativeWidth attribute) (bio_rtd.pdf.TanksInSeries attribute)

OPTIONAL_KEYS() (bio_rtd.core.ChromatographyLoadBreakthrough property) (bio_rtd.core.ParameterSetList property) (bio_rtd.core.PDF property)

P

par_name (bio_rtd.adj_par.AdjParBoolean attribute) (bio_rtd.adj_par.AdjParBooleanMultiple attribute) (bio_rtd.adj_par.AdjParRange attribute) (bio_rtd.adj_par.AdjParSlider attribute) (bio_rtd.adj_par.AdjustableParameter attribute) ParameterSetList (class in bio_rtd.core) PCC (class in bio_rtd.uo.sc_uo) PCCWithWashDesorption (class in bio_rtd.uo.sc_uo) pdf (bio_rtd.uo.fc_uo.FlowThrough attribute) (bio_rtd.uo.fc_uo.FlowThroughWithSwitching attribute)

PDF (class in bio_rtd.core) piece_wise_time_conv() (in module bio_rtd.utils.convolution) POSSIBLE_KEY_GROUPS (bio_rtd.chromatography.bt_load.ConstantPatternSolution attribute) (bio_rtd.pdf.ExpModGaussianFixedDispersion attribute) (bio_rtd.pdf.ExpModGaussianFixedRelativeWidth attribute) (bio_rtd.pdf.GaussianFixedDispersion attribute) (bio_rtd.pdf.GaussianFixedRelativeWidth attribute) (bio_rtd.pdf.TanksInSeries attribute) POSSIBLE_KEY_GROUPS() (bio_rtd.core.ChromatographyLoadBreakthrough property) (bio_rtd.core.ParameterSetList property) (bio_rtd.core.PDF property)

R

recalculate() (bio_rtd.core.RtdModel method) (bio_rtd.core.UserInterface method) refresh() (bio_rtd.core.Inlet method) (bio_rtd.inlet.ConstantInlet method) (bio_rtd.inlet.CustomInlet method) (bio_rtd.inlet.IntervalInlet method) regeneration_cv (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) regeneration_f (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) regeneration_f_rel (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute)

regeneration_t (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) relative_losses (bio_rtd.uo.fc_uo.BufferExchange attribute) (bio_rtd.uo.fc_uo.Concentration attribute) relative_role_switch_time (bio_rtd.uo.surge_tank.TwoAlternatingCSTRs attribute) relative_sigma (bio_rtd.pdf.GaussianFixedRelativeWidth attribute) rt_target (bio_rtd.uo.fc_uo.FlowThrough attribute) (bio_rtd.uo.fc_uo.FlowThroughWithSwitching attribute) (bio_rtd.uo.surge_tank.CSTR attribute) RtdLogger (class in bio_rtd.logger) RtdModel (class in bio_rtd.core)

S

scale_factor (bio_rtd.adj_par.AdjParBoolean attribute) (bio_rtd.adj_par.AdjParBooleanMultiple attribute) (bio_rtd.adj_par.AdjParRange attribute) (bio_rtd.adj_par.AdjParSlider attribute) (bio_rtd.adj_par.AdjustableParameter attribute) set_branch() (bio_rtd.logger.RtdLogger method) set_data_tree() (bio_rtd.logger.RtdLogger method) set_logger_from_parent() (bio_rtd.chromatography.bt_load.ConstantPatternSolution method) (bio_rtd.core.ChromatographyLoadBreakthrough method) (bio_rtd.core.DefaultLoggerLogic method) (bio_rtd.core.Inlet method) (bio_rtd.core.PDF method) (bio_rtd.core.RtdModel method) (bio_rtd.core.UnitOperation method) (bio_rtd.inlet.ConstantInlet method) (bio_rtd.inlet.CustomInlet method) (bio_rtd.inlet.IntervalInlet method) (bio_rtd.pdf.ExpModGaussianFixedDispersion method) (bio_rtd.pdf.ExpModGaussianFixedRelativeWidth method) (bio_rtd.pdf.GaussianFixedDispersion method) (bio_rtd.pdf.GaussianFixedRelativeWidth method) (bio_rtd.pdf.TanksInSeries method) (bio_rtd.uo.fc_uo.BufferExchange method) (bio_rtd.uo.fc_uo.Concentration method) (bio_rtd.uo.fc_uo.Dilution method) (bio_rtd.uo.fc_uo.FlowThrough method) (bio_rtd.uo.fc_uo.FlowThroughWithSwitching method) (bio_rtd.uo.sc_uo.ACC method) (bio_rtd.uo.sc_uo.AlternatingChromatography method) (bio_rtd.uo.sc_uo.PCC method) (bio_rtd.uo.sc_uo.PCCWithWashDesorption method) (bio_rtd.uo.special_uo.ComboUO method) (bio_rtd.uo.surge_tank.CSTR method) (bio_rtd.uo.surge_tank.TwoAlternatingCSTRs method)

sigma_relative (bio_rtd.pdf.ExpModGaussianFixedRelativeWidth attribute) skew (bio_rtd.pdf.ExpModGaussianFixedDispersion attribute) skewed_normal() (in module bio_rtd.peak_shapes) species_label (bio_rtd.core.UserInterface attribute) species_list (bio_rtd.core.Inlet attribute) (bio_rtd.inlet.ConstantInlet attribute) (bio_rtd.inlet.CustomInlet attribute) (bio_rtd.inlet.IntervalInlet attribute) start_at (bio_rtd.core.UserInterface attribute) starts_empty (bio_rtd.uo.surge_tank.CSTR attribute) StrictLogger (class in bio_rtd.logger) sub_uo_list (bio_rtd.uo.special_uo.ComboUO attribute)

T

t_cycle (bio_rtd.uo.fc_uo.FlowThroughWithSwitching attribute) (bio_rtd.uo.surge_tank.TwoAlternatingCSTRs attribute) t_end (bio_rtd.inlet.IntervalInlet attribute) t_start (bio_rtd.inlet.IntervalInlet attribute) tanks_in_series() (in module bio_rtd.peak_shapes) TanksInSeries (class in bio_rtd.pdf) tau_relative (bio_rtd.pdf.ExpModGaussianFixedRelativeWidth attribute) time_conv() (in module bio_rtd.utils.convolution) title (bio_rtd.core.RtdModel attribute)

trim_and_normalize (bio_rtd.core.PDF attribute) (bio_rtd.pdf.ExpModGaussianFixedDispersion attribute) (bio_rtd.pdf.ExpModGaussianFixedRelativeWidth attribute) (bio_rtd.pdf.GaussianFixedDispersion attribute) (bio_rtd.pdf.GaussianFixedRelativeWidth attribute) (bio_rtd.pdf.TanksInSeries attribute) true_end() (in module bio_rtd.utils.vectors) true_start() (in module bio_rtd.utils.vectors) true_start_and_end() (in module bio_rtd.utils.vectors) TwoAlternatingCSTRs (class in bio_rtd.uo.surge_tank)

U

unaccounted_losses_rel (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) UnitOperation (class in bio_rtd.core) uo_id (bio_rtd.core.Inlet attribute) (bio_rtd.core.UnitOperation attribute) (bio_rtd.inlet.ConstantInlet attribute) (bio_rtd.inlet.CustomInlet attribute) (bio_rtd.inlet.IntervalInlet attribute) (bio_rtd.uo.fc_uo.BufferExchange attribute) (bio_rtd.uo.fc_uo.Concentration attribute) (bio_rtd.uo.fc_uo.Dilution attribute) (bio_rtd.uo.fc_uo.FlowThrough attribute) (bio_rtd.uo.fc_uo.FlowThroughWithSwitching attribute) (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) (bio_rtd.uo.special_uo.ComboUO attribute) (bio_rtd.uo.surge_tank.CSTR attribute) (bio_rtd.uo.surge_tank.TwoAlternatingCSTRs attribute)

update_btc_parameters() (bio_rtd.chromatography.bt_load.ConstantPatternSolution method) (bio_rtd.core.ChromatographyLoadBreakthrough method) update_pdf() (bio_rtd.core.PDF method) (bio_rtd.pdf.ExpModGaussianFixedDispersion method) (bio_rtd.pdf.ExpModGaussianFixedRelativeWidth method) (bio_rtd.pdf.GaussianFixedDispersion method) (bio_rtd.pdf.GaussianFixedRelativeWidth method) (bio_rtd.pdf.TanksInSeries method) UserInterface (class in bio_rtd.core)

V

v_cycle (bio_rtd.uo.fc_uo.FlowThroughWithSwitching attribute) (bio_rtd.uo.surge_tank.TwoAlternatingCSTRs attribute) v_cycle_relative (bio_rtd.uo.fc_uo.FlowThroughWithSwitching attribute) v_init (bio_rtd.adj_par.AdjParBoolean attribute) (bio_rtd.adj_par.AdjParBooleanMultiple attribute) (bio_rtd.adj_par.AdjParRange attribute) (bio_rtd.adj_par.AdjParSlider attribute) (bio_rtd.adj_par.AdjustableParameter attribute) (bio_rtd.uo.fc_uo.FlowThrough attribute) (bio_rtd.uo.fc_uo.FlowThroughWithSwitching attribute) (bio_rtd.uo.surge_tank.CSTR attribute) v_init_ratio (bio_rtd.uo.fc_uo.FlowThrough attribute) (bio_rtd.uo.fc_uo.FlowThroughWithSwitching attribute) (bio_rtd.uo.surge_tank.CSTR attribute) v_leftover (bio_rtd.uo.surge_tank.TwoAlternatingCSTRs attribute)

v_leftover_rel (bio_rtd.uo.surge_tank.TwoAlternatingCSTRs attribute) v_min (bio_rtd.uo.surge_tank.CSTR attribute) v_min_ratio (bio_rtd.uo.surge_tank.CSTR attribute) v_range (bio_rtd.adj_par.AdjParBoolean attribute) (bio_rtd.adj_par.AdjParBooleanMultiple attribute) (bio_rtd.adj_par.AdjParRange attribute) (bio_rtd.adj_par.AdjParSlider attribute) (bio_rtd.adj_par.AdjustableParameter attribute) v_void (bio_rtd.uo.fc_uo.FlowThrough attribute) (bio_rtd.uo.fc_uo.FlowThroughWithSwitching attribute) (bio_rtd.uo.surge_tank.CSTR attribute) var_list (bio_rtd.adj_par.AdjParBoolean attribute) (bio_rtd.adj_par.AdjParBooleanMultiple attribute) (bio_rtd.adj_par.AdjParRange attribute) (bio_rtd.adj_par.AdjParSlider attribute) (bio_rtd.adj_par.AdjustableParameter attribute)

W

w() (bio_rtd.logger.RtdLogger method) WARNING (bio_rtd.logger.RtdLogger attribute) wash_cv (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) wash_desorption (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) wash_desorption_desorbable_above_dbc (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) wash_desorption_desorbable_material_share (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) wash_desorption_tail_half_time_cv (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) wash_f (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) wash_f_rel (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute)

wash_recycle (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) wash_recycle_duration_cv (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) wash_recycle_duration_t (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute) wash_t (bio_rtd.uo.sc_uo.ACC attribute) (bio_rtd.uo.sc_uo.AlternatingChromatography attribute) (bio_rtd.uo.sc_uo.PCC attribute) (bio_rtd.uo.sc_uo.PCCWithWashDesorption attribute)

X

x_label (bio_rtd.core.UserInterface attribute)

Y

y_label_c (bio_rtd.core.UserInterface attribute)

y_label_f (bio_rtd.core.UserInterface attribute)